SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB27715

Signal sequence   MELLLFVMSLILLTFSKA

Length  18

Organism  Human herpesvirus 6A (strain Uganda-1102) (HHV-6 variant A) (Human B lymphotropic virus)

UniProt ID  P52508,

Motif  1..18



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  Virion

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB27715.cif

Structure  SPKB27715.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2069.63194

Aliphatic index  173.3333333

Isoelectric point  6.408795646

Charge (pH=7)   -0.000535612

Topological polar surface area  682.03

Aromaticity  0.111111111

Average rotatable bonds  3.888888889

Number of hydrogen bond donors  24

Number of hydrogen bond acceptors  26

X logP energy  -0.0107

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.