SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB27707

Signal sequence   MARFSPMMLLPVAIFAGFAGLSGWA

Length  25

Organism  Paracoccus denitrificans (strain Pd 1222)

UniProt ID  P52236,

Motif  1..25



Activity Information


Pathway  NA

Natural/Artificial  Natural

Subcellular location  Periplasmic space

Secretion efficiency  NA

Type  NA



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB27707.cif

Structure  SPKB27707.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2642.23324

Aliphatic index  94

Isoelectric point  10.55000222

Charge (pH=7)   0.997980988

Topological polar surface area  862.29

Aromaticity  0.16

Average rotatable bonds  3.16

Number of hydrogen bond donors  30

Number of hydrogen bond acceptors  32

X logP energy  -3.16073

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.