SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB27601

Signal sequence   MGFWMAMLLMLLLCLWVSCGIA

Length  22

Organism  Solanum lycopersicum (Tomato) (Lycopersicon esculentum)

UniProt ID  P48980,

Motif  1..22



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB27601.cif

Structure  SPKB27601.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2503.25424

Aliphatic index  146.3636364

Isoelectric point  5.826007312

Charge (pH=7)   -0.125965132

Topological polar surface area  726.23

Aromaticity  0.136363636

Average rotatable bonds  3.590909091

Number of hydrogen bond donors  28

Number of hydrogen bond acceptors  30

X logP energy  2.4154

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.