SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB27574

Signal sequence   MYCTHLRMLQLVVMATLWVTPVRA

Length  24

Organism  Coregonus autumnalis (Arctic cisco) (Salmo autumnalis)

UniProt ID  P48250,

Motif  1..24



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB27574.cif

Structure  SPKB27574.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2833.52544

Aliphatic index  121.6666667

Isoelectric point  9.501216221

Charge (pH=7)   2.026061638

Topological polar surface area  1016.11

Aromaticity  0.083333333

Average rotatable bonds  3.666666667

Number of hydrogen bond donors  38

Number of hydrogen bond acceptors  37

X logP energy  -4.33526

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.