SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB27571

Signal sequence   MMSCFAGTRGSARVWLCAIALCLLASSCARGAAA

Length  34

Organism  Lampetra fluviatilis (European river lamprey) (Petromyzon fluviatilis)

UniProt ID  P48097,

Motif  1..34



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB27571.cif

Structure  SPKB27571.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  3420.12034

Aliphatic index  92.35294118

Isoelectric point  8.696253522

Charge (pH=7)   2.750075502

Topological polar surface area  1326.26

Aromaticity  0.058823529

Average rotatable bonds  3.205882353

Number of hydrogen bond donors  54

Number of hydrogen bond acceptors  49

X logP energy  -15.31159

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.