SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB27471

Signal sequence   MDYHLRVLFSVSLIFVFVSVSVCG

Length  24

Organism  Arabidopsis thaliana (Mouse-ear cress)

UniProt ID  P43295,

Motif  1..24



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  Vacuole

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB27471.cif

Structure  SPKB27471.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2718.26754

Aliphatic index  137.5

Isoelectric point  7.3561659

Charge (pH=7)   0.026511433

Topological polar surface area  961.65

Aromaticity  0.166666667

Average rotatable bonds  3.541666667

Number of hydrogen bond donors  36

Number of hydrogen bond acceptors  35

X logP energy  -4.66723

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.