SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB27287

Signal sequence   MRKWTVPSVLFLLCPSLSSS

Length  20

Organism  Catharanthus roseus (Madagascar periwinkle) (Vinca rosea)

UniProt ID  P35016,

Motif  1..20



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB27287.cif

Structure  SPKB27287.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2251.73034

Aliphatic index  107

Isoelectric point  9.833242293

Charge (pH=7)   1.935711238

Topological polar surface area  823.73

Aromaticity  0.1

Average rotatable bonds  3.45

Number of hydrogen bond donors  31

Number of hydrogen bond acceptors  31

X logP energy  -6.49753

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.