SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB27126

Signal sequence   MYSTKCTNFFLEIIFYVIFCTLFLLVLEKMSKLLSWIVIVCLFVFAISSKCSA

Length  53

Organism  Rotavirus A (strain RVA/Chicken/Ireland/Ch2/1979/G7P[X]) (RV-A) (Rotavirus A (strain Ch-2))

UniProt ID  P29821,

Motif  1..53



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  Virion

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB27126.cif

Structure  SPKB27126.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  6168.62494

Aliphatic index  134.1509434

Isoelectric point  8.326607876

Charge (pH=7)   1.750754717

Topological polar surface area  2036.61

Aromaticity  0.188679245

Average rotatable bonds  3.79245283

Number of hydrogen bond donors  77

Number of hydrogen bond acceptors  78

X logP energy  -4.6648

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.