SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB27090

Signal sequence   MQDFAFAALSIWLCLGATALA

Length  21

Organism  Oncorhynchus mykiss (Rainbow trout) (Salmo gairdneri)

UniProt ID  P28771,

Motif  1..21



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB27090.cif

Structure  SPKB27090.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2213.63734

Aliphatic index  121.4285714

Isoelectric point  3.749971454

Charge (pH=7)   -1.063543932

Topological polar surface area  781.96

Aromaticity  0.142857143

Average rotatable bonds  3.238095238

Number of hydrogen bond donors  28

Number of hydrogen bond acceptors  28

X logP energy  -3.9188

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.