SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB26984

Signal sequence   MYGIEYTTILIFLISIILLNYIVKSVTRIMDYIIYRFLLISVALFALTRA

Length  50

Organism  Rotavirus A (strain RVA/Human/Australia/RV-4/1977/G1P1A[8]) (RV-A) (Rotavirus A (strain RV4))

UniProt ID  P25187,

Motif  1..50



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  Virion

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB26984.cif

Structure  SPKB26984.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  5876.22444

Aliphatic index  171.6

Isoelectric point  9.525830449

Charge (pH=7)   1.995648867

Topological polar surface area  2061.39

Aromaticity  0.16

Average rotatable bonds  3.84

Number of hydrogen bond donors  76

Number of hydrogen bond acceptors  72

X logP energy  -3.70189

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.