SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB26872

Signal sequence   MSCYTAILKSVGGLALFQVANG

Length  22

Organism  Vaccinia virus (strain Copenhagen) (VACV)

UniProt ID  P20987,

Motif  1..22



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  Virion

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB26872.cif

Structure  SPKB26872.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2243.66424

Aliphatic index  110.9090909

Isoelectric point  8.522939048

Charge (pH=7)   0.934864135

Topological polar surface area  867.54

Aromaticity  0.090909091

Average rotatable bonds  3.318181818

Number of hydrogen bond donors  31

Number of hydrogen bond acceptors  32

X logP energy  -8.4614

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.