SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB26780

Signal sequence   VRKNYNNCYILSFLLVFFVLILFPPAFT

Length  28

Organism  Brassica oleracea (Wild cabbage)

UniProt ID  P17841,

Motif  <1..28



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB26780.cif

Structure  SPKB26780.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  3353.07114

Aliphatic index  132.1428571

Isoelectric point  9.298546388

Charge (pH=7)   1.93401041

Topological polar surface area  1129.55

Aromaticity  0.25

Average rotatable bonds  3.607142857

Number of hydrogen bond donors  39

Number of hydrogen bond acceptors  39

X logP energy  -1.75763

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.