SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB26736

Signal sequence   MGSNIVIYFSIIVIVTLNVNGV

Length  22

Organism  Ciona intestinalis (Transparent sea squirt) (Ascidia intestinalis)

UniProt ID  P16240,

Motif  1..22



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB26736.cif

Structure  SPKB26736.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2365.85654

Aliphatic index  172.2727273

Isoelectric point  6.093198033

Charge (pH=7)   -0.002866115

Topological polar surface area  884.61

Aromaticity  0.090909091

Average rotatable bonds  3.454545455

Number of hydrogen bond donors  30

Number of hydrogen bond acceptors  31

X logP energy  -5.6658

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.