SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB26733

Signal sequence   MRFWALTVLSLLLSLLLGVSSDT

Length  23

Organism  Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp. trichocarpa)

UniProt ID  P16061,

Motif  1..23



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB26733.cif

Structure  SPKB26733.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2536.06784

Aliphatic index  165.2173913

Isoelectric point  6.338718596

Charge (pH=7)   -0.001572528

Topological polar surface area  939.89

Aromaticity  0.086956522

Average rotatable bonds  3.565217391

Number of hydrogen bond donors  35

Number of hydrogen bond acceptors  33

X logP energy  -5.41543

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.