SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB26626

Signal sequence   MYGIEYTTVLFYLISFVLVSYILKTITKMMDYIIYRETFIIVVLSVLSNA

Length  50

Organism  Rotavirus A (isolate RVA/Human/Italy/VA70/1975/G4P1A[8]) (RV-A)

UniProt ID  P11856,

Motif  1..50



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  Virion

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB26626.cif

Structure  SPKB26626.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  5893.13414

Aliphatic index  146

Isoelectric point  6.545600721

Charge (pH=7)   -0.003714835

Topological polar surface area  2061.6

Aromaticity  0.18

Average rotatable bonds  3.82

Number of hydrogen bond donors  75

Number of hydrogen bond acceptors  76

X logP energy  -5.46243

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.