SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB26598

Signal sequence   MYGIEYTTVLFYLISFVLVSYILKTIIKIMDYIIYRITFVIVVLSVLSNA

Length  50

Organism  Rotavirus A (strain RVA/Human/United Kingdom/ST3/1975/G4P2A[6]) (RV-A) (Rotavirus A (strain St. Thomas 3))

UniProt ID  P10501,

Motif  1..50



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  Virion

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB26598.cif

Structure  SPKB26598.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  5857.17234

Aliphatic index  167.4

Isoelectric point  8.864079134

Charge (pH=7)   0.994510042

Topological polar surface area  2004.07

Aromaticity  0.18

Average rotatable bonds  3.78

Number of hydrogen bond donors  73

Number of hydrogen bond acceptors  73

X logP energy  -2.71293

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.