SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB26560

Signal sequence   MIVVKKAIAALGIGAVAVSVSSINASA

Length  27

Organism  Clostridioides difficile (strain R20291) (Peptoclostridium difficile)

UniProt ID  P0DX27,

Motif  1..27



Activity Information


Pathway  NA

Natural/Artificial  Natural

Subcellular location  Extracellular environment

Secretion efficiency  NA

Type  NA



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB26560.cif

Structure  SPKB26560.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2541.08804

Aliphatic index  151.8518519

Isoelectric point  10.80537956

Charge (pH=7)   1.997394232

Topological polar surface area  995.97

Aromaticity  0

Average rotatable bonds  3.148148148

Number of hydrogen bond donors  35

Number of hydrogen bond acceptors  36

X logP energy  -10.2286

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.