SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB26541

Signal sequence   MRLFIALPVLIVVVAMALEGPAPAQA

Length  26

Organism  Grammomys surdaster (African woodland thicket rat) (Thamnomys surdaster)

UniProt ID  P0DUX4,

Motif  1..26



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB26541.cif

Structure  SPKB26541.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2691.37234

Aliphatic index  157.6923077

Isoelectric point  6.410149741

Charge (pH=7)   -0.000243889

Topological polar surface area  906.74

Aromaticity  0.038461538

Average rotatable bonds  3.153846154

Number of hydrogen bond donors  29

Number of hydrogen bond acceptors  32

X logP energy  -2.16923

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.