SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB26418

Signal sequence   MHFVAVYILTHFHAYPGVAA

Length  20

Organism  Human herpesvirus 6B (strain Z29) (HHV-6 variant B) (Human B lymphotropic virus)

UniProt ID  P0DOE1,

Motif  1..20



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  Virion

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB26418.cif

Structure  SPKB26418.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2244.64184

Aliphatic index  102.5

Isoelectric point  7.794194312

Charge (pH=7)   0.269010744

Topological polar surface area  754.16

Aromaticity  0.2

Average rotatable bonds  3.15

Number of hydrogen bond donors  26

Number of hydrogen bond acceptors  28

X logP energy  -1.6998

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.