SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB26413

Signal sequence   MTKKGPLNLRLLLLLLVVLLPSCSNC

Length  26

Organism  Arabidopsis thaliana (Mouse-ear cress)

UniProt ID  P0DO60,

Motif  1..26



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB26413.cif

Structure  SPKB26413.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2852.63474

Aliphatic index  172.3076923

Isoelectric point  9.759884537

Charge (pH=7)   2.873441489

Topological polar surface area  1034.05

Aromaticity  0

Average rotatable bonds  3.653846154

Number of hydrogen bond donors  37

Number of hydrogen bond acceptors  38

X logP energy  -5.81473

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.