SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB26290

Signal sequence   MRGAYYVLTALFVVTSSDIA

Length  20

Organism  Plasmopara viticola (Downy mildew of grapevine) (Botrytis viticola)

UniProt ID  P0CV43,

Motif  1..20



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB26290.cif

Structure  SPKB26290.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2177.54344

Aliphatic index  117

Isoelectric point  6.325280332

Charge (pH=7)   -0.003273356

Topological polar surface area  836.8

Aromaticity  0.15

Average rotatable bonds  3.35

Number of hydrogen bond donors  31

Number of hydrogen bond acceptors  30

X logP energy  -6.21653

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.