SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB26139

Signal sequence   METCQMSRSPRERLLLLLLLLLLVPWGTGP

Length  30

Organism  Rattus norvegicus (Rat)

UniProt ID  P0C172,

Motif  1..30



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB26139.cif

Structure  SPKB26139.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  3437.22374

Aliphatic index  139.6666667

Isoelectric point  8.549778494

Charge (pH=7)   0.939549895

Topological polar surface area  1280.95

Aromaticity  0.033333333

Average rotatable bonds  3.7

Number of hydrogen bond donors  46

Number of hydrogen bond acceptors  44

X logP energy  -6.95299

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.