SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB25902

Signal sequence   MLINNKKLLHHILPILVLALLGMRTAQA

Length  28

Organism  Bordetella pertussis (strain Tohama I / ATCC BAA-589 / NCTC 13251)

UniProt ID  P04979,

Motif  1..28



Activity Information


Pathway  NA

Natural/Artificial  Natural

Subcellular location  Cell membrane

Secretion efficiency  NA

Type  NA



Structure Information


PDB ID  6RO0,

Predicted Structure ID  SPKB25902.cif

Structure  SPKB25902.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  3135.95274

Aliphatic index  174.2857143

Isoelectric point  11.82306892

Charge (pH=7)   3.179209102

Topological polar surface area  1161.03

Aromaticity  0

Average rotatable bonds  3.821428571

Number of hydrogen bond donors  39

Number of hydrogen bond acceptors  40

X logP energy  -4.79553

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.