SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB25752

Signal sequence   MIKHYDVVIAGGGVIGAS

Length  18

Organism  Pseudomonas protegens (strain DSM 19095 / LMG 27888 / CFBP 6595 / CHA0)

UniProt ID  O85228,

Motif  1..18



Activity Information


Pathway  Sec

Natural/Artificial  Natural

Subcellular location  Cell membrane

Secretion efficiency  NA

Type  Sec/SPII



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB25752.cif

Structure  SPKB25752.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  1787.10704

Aliphatic index  124.4444444

Isoelectric point  7.54143389

Charge (pH=7)   0.088194426

Topological polar surface area  690.48

Aromaticity  0.055555556

Average rotatable bonds  3.222222222

Number of hydrogen bond donors  24

Number of hydrogen bond acceptors  25

X logP energy  -5.4252

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.