SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB25741

Signal sequence   MSPSCSSCVNVLLIMCLMLLSLSADA

Length  26

Organism  Arabidopsis thaliana (Mouse-ear cress)

UniProt ID  O82083,

Motif  1..26



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB25741.cif

Structure  SPKB25741.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2702.32634

Aliphatic index  135

Isoelectric point  3.74993964

Charge (pH=7)   -1.187493364

Topological polar surface area  983.8

Aromaticity  0

Average rotatable bonds  3.384615385

Number of hydrogen bond donors  37

Number of hydrogen bond acceptors  41

X logP energy  -9.9484

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.