SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB25586

Signal sequence   MDIQRTQSLLLLLLLTLLGLGLVQPSYG

Length  28

Organism  Rattus norvegicus (Rat)

UniProt ID  O55004,

Motif  1..28



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB25586.cif

Structure  SPKB25586.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  3069.73644

Aliphatic index  177.5

Isoelectric point  6.331895378

Charge (pH=7)   -0.002422942

Topological polar surface area  1169.85

Aromaticity  0.035714286

Average rotatable bonds  3.678571429

Number of hydrogen bond donors  40

Number of hydrogen bond acceptors  40

X logP energy  -6.92043

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.