SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB25564

Signal sequence   MGCVKLVFFMLLKLDLLEF

Length  19

Organism  Solanum lycopersicum (Tomato) (Lycopersicon esculentum)

UniProt ID  O49879,

Motif  1..19



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB25564.cif

Structure  SPKB25564.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2259.89484

Aliphatic index  153.6842105

Isoelectric point  6.316815226

Charge (pH=7)   -0.062358877

Topological polar surface area  713.76

Aromaticity  0.157894737

Average rotatable bonds  4.052631579

Number of hydrogen bond donors  25

Number of hydrogen bond acceptors  27

X logP energy  2.1063

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.