SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB25504

Signal sequence   MDNRSVQRRRTGDVRHLLLAAAFLTCNS

Length  28

Organism  Oryzias latipes (Japanese rice fish) (Japanese killifish)

UniProt ID  O42122,

Motif  1..28



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB25504.cif

Structure  SPKB25504.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  3201.67504

Aliphatic index  87.14285714

Isoelectric point  11.89843177

Charge (pH=7)   3.027795086

Topological polar surface area  1471.99

Aromaticity  0.035714286

Average rotatable bonds  3.857142857

Number of hydrogen bond donors  55

Number of hydrogen bond acceptors  46

X logP energy  -18.40495

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.