SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB25378

Signal sequence   MVGMTRIQSAEPVWILFVLTLYSSVLM

Length  27

Organism  Halocynthia roretzi (Sea squirt) (Cynthia roretzi)

UniProt ID  O15978,

Motif  1..27



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB25378.cif

Structure  SPKB25378.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  3085.77154

Aliphatic index  133.3333333

Isoelectric point  6.403313374

Charge (pH=7)   -0.001094303

Topological polar surface area  1090.59

Aromaticity  0.111111111

Average rotatable bonds  3.62962963

Number of hydrogen bond donors  39

Number of hydrogen bond acceptors  40

X logP energy  -4.63243

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.