SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB25333

Signal sequence   MASYHSKAAFLCLFLLVSFNIVSS

Length  24

Organism  Cucurbita pepo (Vegetable marrow) (Summer squash)

UniProt ID  O04057,

Motif  1..24



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  Vacuole

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB25333.cif

Structure  SPKB25333.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2649.16104

Aliphatic index  117.9166667

Isoelectric point  8.530526343

Charge (pH=7)   1.025773226

Topological polar surface area  951.79

Aromaticity  0.166666667

Average rotatable bonds  3.5

Number of hydrogen bond donors  35

Number of hydrogen bond acceptors  36

X logP energy  -6.5581

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.