SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB25303

Signal sequence   MSVRYAGLLLAAVAVSAHINEVNS

Length  24

Organism  Hyaloperonospora arabidopsidis (strain Emoy2) (Downy mildew agent) (Peronospora arabidopsidis)

UniProt ID  M4C4U1,

Motif  1..24



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB25303.cif

Structure  SPKB25303.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2485.88404

Aliphatic index  134.1666667

Isoelectric point  7.543339196

Charge (pH=7)   0.089814788

Topological polar surface area  1027.6

Aromaticity  0.041666667

Average rotatable bonds  3.333333333

Number of hydrogen bond donors  36

Number of hydrogen bond acceptors  35

X logP energy  -10.38903

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.