SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB25108

Signal sequence   MDTFNFIICISALFHSTYG

Length  19

Organism  Xenopus tropicalis (Western clawed frog) (Silurana tropicalis)

UniProt ID  F7C0L1,

Motif  1..19



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB25108.cif

Structure  SPKB25108.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2180.52084

Aliphatic index  87.36842105

Isoelectric point  5.289817891

Charge (pH=7)   -0.973485256

Topological polar surface area  797.34

Aromaticity  0.210526316

Average rotatable bonds  3.526315789

Number of hydrogen bond donors  29

Number of hydrogen bond acceptors  30

X logP energy  -5.6182

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.