SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB25078

Signal sequence   MTQYFRSLAFFLLPVPATAMA

Length  21

Organism  Bordetella pertussis (strain CS)

UniProt ID  F4LAC2,

Motif  1..21



Activity Information


Pathway  Sec

Natural/Artificial  Natural

Subcellular location  Cell membrane

Secretion efficiency  NA

Type  Sec/SPII



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB25078.cif

Structure  SPKB25078.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2375.87224

Aliphatic index  88.57142857

Isoelectric point  9.348807885

Charge (pH=7)   0.997130574

Topological polar surface area  813.65

Aromaticity  0.19047619

Average rotatable bonds  3.333333333

Number of hydrogen bond donors  28

Number of hydrogen bond acceptors  30

X logP energy  -3.55413

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.