SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB25076

Signal sequence   MAKRDYFCFVVLFLSSVSA

Length  19

Organism  Arabidopsis thaliana (Mouse-ear cress)

UniProt ID  F4KGD4,

Motif  1..19



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB25076.cif

Structure  SPKB25076.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2183.61144

Aliphatic index  97.36842105

Isoelectric point  8.522871991

Charge (pH=7)   0.935307308

Topological polar surface area  793.26

Aromaticity  0.210526316

Average rotatable bonds  3.631578947

Number of hydrogen bond donors  30

Number of hydrogen bond acceptors  29

X logP energy  -4.57213

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.