SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB25063

Signal sequence   MIQTLKTDSSFRLCFAAIAFGFVFIMNGKLSS

Length  32

Organism  Arabidopsis thaliana (Mouse-ear cress)

UniProt ID  F4JJH4,

Motif  1..32



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB25063.cif

Structure  SPKB25063.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  3545.23324

Aliphatic index  91.5625

Isoelectric point  9.673752869

Charge (pH=7)   1.935862689

Topological polar surface area  1324.22

Aromaticity  0.15625

Average rotatable bonds  3.6875

Number of hydrogen bond donors  48

Number of hydrogen bond acceptors  48

X logP energy  -10.80063

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.