SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB25054

Signal sequence   MIGELDFPFLGAGSTGGACGFAVANPPLYGMVSAGGPSVFNNGIGCGTCFQILCNGHPACSRRPITVTITDECPGGPCASEPAHFDLSGKAMGALARPGQGDRLRSAGVLRVYYRRVECLYRRTNIAFRMDPGANPYYISFVVEYENGDGDLAYIEIQPADGEFIPMQEMRSAVWKISSGSPLTGPFNIRLTSAESHKVVLAYNVIPANWKPNETYRSVVNFK

Length  100

Organism  Arabidopsis thaliana (Mouse-ear cress)

UniProt ID  F4IBJ3,

Motif  1..NA



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB25054.cif

Structure  SPKB25054.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  24013.35504

Aliphatic index  73.94618834

Isoelectric point  7.239957179

Charge (pH=7)   -0.212013601

Topological polar surface area  9565.58

Aromaticity  0.103139013

Average rotatable bonds  3.394618834

Number of hydrogen bond donors  335

Number of hydrogen bond acceptors  329

X logP energy  -132.87772

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.