SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB24652

Signal sequence   MSRSKMSSQRLWAVRAQFLLLWLLLWAAPVPWAEA

Length  35

Organism  Rattus norvegicus (Rat)

UniProt ID  D3ZKF5,

Motif  1..35



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB24652.cif

Structure  SPKB24652.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  4113.94334

Aliphatic index  111.7142857

Isoelectric point  12.22263526

Charge (pH=7)   2.999454454

Topological polar surface area  1514.42

Aromaticity  0.142857143

Average rotatable bonds  3.657142857

Number of hydrogen bond donors  55

Number of hydrogen bond acceptors  49

X logP energy  -6.42329

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.