SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB24489

Signal sequence   MHKHRKPTEADVTPESLFYQRRRILKALGISAAALSLPFSAQA

Length  43

Organism  Pectobacterium carotovorum subsp. carotovorum (strain PC1)

UniProt ID  C6DIK7,

Motif  1..43



Activity Information


Pathway  Tat

Natural/Artificial  Natural

Subcellular location  Periplasmic space

Secretion efficiency  NA

Type  Tat/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB24489.cif

Structure  SPKB24489.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  4807.59754

Aliphatic index  86.51162791

Isoelectric point  11.07243661

Charge (pH=7)   4.18205045

Topological polar surface area  1981.86

Aromaticity  0.069767442

Average rotatable bonds  3.674418605

Number of hydrogen bond donors  70

Number of hydrogen bond acceptors  66

X logP energy  -18.94752

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.