SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB24262

Signal sequence   MAPSLSTAVSSLLLLLLLAAAISVSSS

Length  27

Organism  Oryza sativa subsp. japonica (Rice)

UniProt ID  B9FDT1,

Motif  1..27



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB24262.cif

Structure  SPKB24262.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2616.14904

Aliphatic index  170

Isoelectric point  6.099999998

Charge (pH=7)   -0.002015701

Topological polar surface area  993.2

Aromaticity  0

Average rotatable bonds  3.111111111

Number of hydrogen bond donors  36

Number of hydrogen bond acceptors  38

X logP energy  -10.592

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.