SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB24261

Signal sequence   MDPPPRPRPHRVAVLLLLLLASSPAARA

Length  28

Organism  Oryza sativa subsp. japonica (Rice)

UniProt ID  B9F676,

Motif  1..28



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB24261.cif

Structure  SPKB24261.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  3015.65974

Aliphatic index  122.1428571

Isoelectric point  12.50005509

Charge (pH=7)   3.089326629

Topological polar surface area  1150.32

Aromaticity  0

Average rotatable bonds  3.142857143

Number of hydrogen bond donors  39

Number of hydrogen bond acceptors  38

X logP energy  -8.55552

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.