SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB24077

Signal sequence   MAVAGAVAMSGGILLLLLLLLLLLAAACVEA

Length  31

Organism  Oryza sativa subsp. japonica (Rice)

UniProt ID  B7ECS8,

Motif  1..31



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB24077.cif

Structure  SPKB24077.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2994.82964

Aliphatic index  204.8387097

Isoelectric point  3.849962145

Charge (pH=7)   -1.062215294

Topological polar surface area  993.85

Aromaticity  0

Average rotatable bonds  3.193548387

Number of hydrogen bond donors  35

Number of hydrogen bond acceptors  37

X logP energy  -2.19

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.