SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB23883

Signal sequence   MYGIEYTTTLTFLILLVLLNYILKSITRIMDYILYHFLLFIVIVTPFVNS

Length  50

Organism  Rotavirus A (strain RVA/Human/Indonesia/69M/1980/G8P4[10]) (RV-A)

UniProt ID  B3SRQ7,

Motif  1..50



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  Virion

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB23883.cif

Structure  SPKB23883.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  5947.25644

Aliphatic index  163.6

Isoelectric point  7.513339865

Charge (pH=7)   0.086564581

Topological polar surface area  2020.8

Aromaticity  0.18

Average rotatable bonds  3.78

Number of hydrogen bond donors  72

Number of hydrogen bond acceptors  73

X logP energy  -2.31883

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.