SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB23804

Signal sequence   MQKKRIGKSVVAALAIIAMSAGTVAAWA

Length  28

Organism  Burkholderia ambifaria (strain MC40-6)

UniProt ID  B1Z5M2,

Motif  1..28



Activity Information


Pathway  NA

Natural/Artificial  Natural

Subcellular location  Extracellular environment

Secretion efficiency  NA

Type  NA



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB23804.cif

Structure  SPKB23804.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2843.48524

Aliphatic index  115.3571429

Isoelectric point  11.92450937

Charge (pH=7)   3.997095887

Topological polar surface area  1108.55

Aromaticity  0.035714286

Average rotatable bonds  3.428571429

Number of hydrogen bond donors  40

Number of hydrogen bond acceptors  39

X logP energy  -9.42633

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.