SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB23535

Signal sequence   LWNYILKSITRIMDYIIYRFLLIVVILATIINA

Length  33

Organism  Rotavirus A (strain RVA/Cow/Canada/C486/1977/G6P6[1]) (RV-A)

UniProt ID  A8D8S8,

Motif  <1..33



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  Virion

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB23535.cif

Structure  SPKB23535.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  3969.91374

Aliphatic index  189.0909091

Isoelectric point  9.779947684

Charge (pH=7)   1.995577884

Topological polar surface area  1404.99

Aromaticity  0.151515152

Average rotatable bonds  3.909090909

Number of hydrogen bond donors  51

Number of hydrogen bond acceptors  47

X logP energy  -0.89126

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.