SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB23408

Signal sequence   MSILRAKTSGAQQHEEFRMAFKLSYITGRQDNNVLEVTLAAGQNAVVHATVKNTGTEALNLLKYGTLFDSAPVQKVDVYEGENAVPFKGILRSIQRTDLAPEVFHTLAAGETFETTFNAAEVHDLSSTNYTFIAEGTIPVAPVGSTKISDTIFFKSNTLTIPVDGAAAQSMAKAIPASIDRRTILQSGCSTTQKTQTTQALSYCAQLARAASTAASSGSATKFSEYFKTTAAATRSVVAARLSAVASQCSSLTSGSTTYYCTDIYNYCSSNVLAYTIPSTNEIVNCPLYYSALPTLSGTCHAQDRATTSLHEFTHAPATYSPGTADNGYGYSAAVALTSAKAVLNADSYALYANAIYVGC

Length  100

Organism  Sclerotinia sclerotiorum (strain ATCC 18683 / 1980 / Ss-1) (White mold) (Whetzelinia sclerotiorum)

UniProt ID  A7F811,

Motif  1..NA



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB23408.cif

Structure  SPKB23408.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  38094.59904

Aliphatic index  78.22222222

Isoelectric point  6.848847945

Charge (pH=7)   -1.851269998

Topological polar surface area  15910.16

Aromaticity  0.088888889

Average rotatable bonds  2.777777778

Number of hydrogen bond donors  566

Number of hydrogen bond acceptors  559

X logP energy  -322.21233

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.