SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB23248

Signal sequence   MFARPAIRMRCATGLLAIGTLLMLA

Length  25

Organism  Ectopseudomonas mendocina (strain ymp) (Pseudomonas mendocina)

UniProt ID  A4XXV1,

Motif  1..25



Activity Information


Pathway  Sec

Natural/Artificial  Natural

Subcellular location  Cell membrane

Secretion efficiency  NA

Type  Sec/SPII



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB23248.cif

Structure  SPKB23248.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2691.41144

Aliphatic index  129.2

Isoelectric point  12.19926402

Charge (pH=7)   2.93599965

Topological polar surface area  979.09

Aromaticity  0.04

Average rotatable bonds  3.52

Number of hydrogen bond donors  37

Number of hydrogen bond acceptors  35

X logP energy  -5.79209

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.