SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB23176

Signal sequence   MTRLNTCTFIKQIVKMTSIAALLGASLNSWA

Length  31

Organism  Shewanella loihica (strain ATCC BAA-1088 / PV-4)

UniProt ID  A3QCW5,

Motif  1..31



Activity Information


Pathway  NA

Natural/Artificial  Natural

Subcellular location  Periplasmic space

Secretion efficiency  NA

Type  NA



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB23176.cif

Structure  SPKB23176.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  3384.07354

Aliphatic index  110.3225806

Isoelectric point  10.79319833

Charge (pH=7)   2.935416204

Topological polar surface area  1336.93

Aromaticity  0.064516129

Average rotatable bonds  3.64516129

Number of hydrogen bond donors  49

Number of hydrogen bond acceptors  48

X logP energy  -12.92763

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.