SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB23045

Signal sequence   MDVTRLVLATLLVFLCFFAAYS

Length  22

Organism  Cebuella pygmaea (Pygmy marmoset) (Callithrix pygmaea)

UniProt ID  A1YL79,

Motif  1..22



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB23045.cif

Structure  SPKB23045.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2494.04814

Aliphatic index  141.8181818

Isoelectric point  6.158123832

Charge (pH=7)   -0.064397658

Topological polar surface area  854.54

Aromaticity  0.181818182

Average rotatable bonds  3.5

Number of hydrogen bond donors  32

Number of hydrogen bond acceptors  31

X logP energy  -2.31153

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.