SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB22557

Signal sequence   MATKISHLVSLLLSLLLLLLFISSQVGFTEA

Length  31

Organism  Arabidopsis thaliana (Mouse-ear cress)

UniProt ID  A0A178U9T0,

Motif  1..31



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB22557.cif

Structure  SPKB22557.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  3359.11114

Aliphatic index  176.1290323

Isoelectric point  7.549726882

Charge (pH=7)   0.090373479

Topological polar surface area  1213.02

Aromaticity  0.064516129

Average rotatable bonds  3.64516129

Number of hydrogen bond donors  43

Number of hydrogen bond acceptors  44

X logP energy  -6.3346

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.