SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB22013

Signal sequence   MLTRFKKQNNKMVRANIVSMVLLMHAIVGFPFHARG

Length  36

Organism  Arabidopsis thaliana (Mouse-ear cress)

UniProt ID  Q9SZB9,

Motif  1..36



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB22013.cif

Structure  SPKB22013.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  4157.09214

Aliphatic index  94.72222222

Isoelectric point  12.81970517

Charge (pH=7)   6.178907446

Topological polar surface area  1606.97

Aromaticity  0.083333333

Average rotatable bonds  3.916666667

Number of hydrogen bond donors  56

Number of hydrogen bond acceptors  55

X logP energy  -11.83679

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.